TreeTime¶

Description¶

TreeTime provides routines for ancestral sequence reconstruction and inference of molecular-clock phylogenies, i.e., a tree where all branches are scaled such that the positions of terminal nodes correspond to their sampling times and internal nodes are placed at the most likely time of divergence.

Environment Modules¶

Run module spider treetime to find out what environment modules are available for this application.

Environment Variables¶

HPC_TREETIME_DIR - installation directory
HPC_TREETIME_BIN - executable directory

Categories¶

phylogenetics