Trans-ABySS¶
Description¶
De novo assembly of RNAseq data using ABySS
Environment Modules¶
Run module spider transabyss to find out what environment modules are available for this application.
Environment Variables¶
- HPC_TRANSABYSS_DIR - installation directory
- HPC_TRANSABYSS_BIN - executable directory
- HPC_TRANSABYSS_DOC - documentation directory
- HPC_TRANSABYSS_EXE - examples directory
- HPC_TRANSABYSS_CONF - configs directory
Citation¶
If you publish research that uses transabyss you have to cite it as follows:
Robertson, G., Schein, J., Chiu, R. et al. De novo assembly and analysis of RNA-seq data. Nat Methods 7, 909–912 (2010). https://doi.org/10.1038/nmeth.1517
Categories¶
biology, phylogenetics