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Trans-ABySS

Description

transabyss website

De novo assembly of RNAseq data using ABySS

Environment Modules

Run module spider transabyss to find out what environment modules are available for this application.

Environment Variables

  • HPC_TRANSABYSS_DIR - installation directory
  • HPC_TRANSABYSS_BIN - executable directory
  • HPC_TRANSABYSS_DOC - documentation directory
  • HPC_TRANSABYSS_EXE - examples directory
  • HPC_TRANSABYSS_CONF - configs directory

Citation

If you publish research that uses transabyss you have to cite it as follows:

Robertson, G., et al. 2010. De novo assembly and analysis of RNA-seq data. Nature Methods 7, 909-912(2010)

Categories

biology, phylogenetics