taxMaps

Description

taxmaps website

taxMaps is an ultra-efficient, customizable and fully scalable taxonomic classification tool for short-read data designed to deal with large DNA/RNA metagenomics samples. Its performance and comprehensiveness makes it highly suitable for unbiased contamination detection in large-scale sequencing operations, microbiome studies comprising a large number of samples, and for applications where the analysis delivery time is a critical factor, such as pathogen identification from clinical or environmental samples. * TAXMAPS_DB - database directory

Environment Modules

Run module spider taxmaps to find out what environment modules are available for this application.

Environment Variables

• HPC_TAXMAPS_DIR - installation directory
• HPC_TAXMAPS_BIN - executable directory
• HPC_TAXMAPS_DOC - documentation directory

Categories

biology, phylogenetics, genomics