TAPIS¶

Description¶

TAPIS (Transriptome Analysis Pipeline from Isoform Sequencing) is a program for correcting and aligning long reads with/without second generation reads, transcript clustering, novel and full-length splice isoform detection, and identification and analysis of polyadenylation (poly(A)) and alternative poly(A) (APA).

Environment Modules¶

Run module spider tapis to find out what environment modules are available for this application.

Environment Variables¶

HPC_TAPIS_DIR - installation directory
HPC_TAPIS_BIN - executable directory

Categories¶

biology, sequencing