tapir

Description

tapir website

tapir contains programs to estimate and plot phylogenetic informativeness for large datasets.

Environment Modules

Run module spider tapir to find out what environment modules are available for this application.

Environment Variables

• HPC_TAPIR_DIR - installation directory
• HPC_TAPIR_BIN - executable directory

Citation

If you publish research that uses tapir you have to cite it as follows:

Faircloth BC, Chang J, Alfaro ME: TAPIR enables high throughput analysis of phylogenetic informativeness. arXiv:1202.1215

Townsend JP: Profiling phylogenetic informativeness. Systematic Biol. 2007, 56:222-231.

Pond SLK, Frost SDW, Muse SV: HyPhy: hypothesis testing using phylogenies. Bioinformatics 2005, 21:676-679.

Categories

biology, phylogenetics