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syri

Description

syri website

SyRI is a comprehensive tool for predicting genomic differences between related genomes using whole-genome assemblies (WGA).

Environment Modules

Run module spider syri to find out what environment modules are available for this application.

Environment Variables

  • HPC_SYRI_DIR - installation directory
  • HPC_SYRI_BIN - executable directory

Citation

If you publish research that uses syri you have to cite it as follows:

Goel, M., Sun, H., Jiao, W., & Schneeberger, K. (2019). SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies. Genome Biology, 20(1), 277. https://doi.org/10.1186/s13059-019-1911-0

Categories

genomics, biology