Structure

Description

structure website

The program Structure implements a model-based clustering method for inferring population structure using genotype data consisting of unlinked markers You will have to provide the mainparams and extraparams files in a working directory from which you run the software or via the arguments: * -m /path/to/mainparams * -e /path/to/extraparams * -s /path/to/STRATparams

Environment Modules

Run module spider structure to find out what environment modules are available for this application.

Environment Variables

Sample files are located in the $HPC_STRUCTURE_CONF directory. * HPC_STRUCTURE_DIR - installation directory * HPC_STRUCTURE_BIN - executable directory * HPC_STRUCTURE_DOC - documentation directory * HPC_STRUCTURE_CONF - directory with example configuration files

Categories

biology, genomics