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starseqr

Description

starseqr website

RNA Fusion Detection and Quantification using STAR. Post-alignment run times are typically <20 minutes using 4 threads. Development is still ongoing and several features are currently in the works. DNA breakpoint detection is still experimental.fqjk

Environment Modules

Run module spider starseqr to find out what environment modules are available for this application.

Environment Variables

  • HPC_STARSEQR_DIR - installation directory
  • HPC_STARSEQR_BIN - executable directory

Categories

phylogenetics