squigglenet¶

Description¶

SquiggleNet is a 1D ResNet based model to classify Oxford Nanopore raw electrical signals as target or non-target for Read-Until sequence enrichment or depletion.

Environment Modules¶

Run module spider squigglenet to find out what environment modules are available for this application.

Environment Variables¶

HPC_SQUIGGLENET_DIR - installation directory
HPC_SQUIGGLENET_BIN - executable directory

Categories¶

sequencing, biology