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SpliceTrap

Description

splicetrap website

This module lets you use the SpliceTrap software.

Environment Modules

Run module spider splicetrap to find out what environment modules are available for this application.

Environment Variables

  • HPC_SPLICETRAP_DIR - installation directory
  • HPC_SPLICETRAP_BIN - executable directory

Additional Usage Information

The main executable is SpliceTrap

The following databases are available by default:

  • hg18
  • hg19
  • mm9
  • rn4

Categories

biology, genomics, ngs