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SPAdes

Description

spades website

SPAdes - St. Petersburg genome assembler - is intended for both standard isolates and single-cell MDA bacteria assemblies.

Environment Modules

Run module spider spades to find out what environment modules are available for this application.

Environment Variables

  • HPC_SPADES_DIR - installation directory
  • HPC_SPADES_BIN - executable directory

Categories

biology, ngs