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Sourmash

Description

sourmash website

Compute and compare MinHash signatures for DNA data sets.

Environment Modules

Run module spider sourmash to find out what environment modules are available for this application.

Environment Variables

  • HPC_SOURMASH_DIR - installation directory
  • HPC_SOURMASH_BIN - executable directory

Citation

If you publish research that uses sourmash you have to cite it as follows:

Sourmash 1.0 is published on JOSS; please cite that paper if you use (doi: 10.21105/joss.00027):.

Categories

phylogenetics