SortaDate¶

Description¶

Scripts that you can use at different stages to attempt to find more clock-like genes. Generally, you would use these for dating analyses with another package.

Environment Modules¶

Run module spider sortadate to find out what environment modules are available for this application.

Environment Variables¶

HPC_SORTADATE_DIR - installation directory
HPC_SORTADATE_BIN - executable directory
HPC_SORTADATE_DOC - documentation directory
HPC_SORTADATE_EXE - examples directory

Citation¶

If you publish research that uses sortadate you have to cite it as follows:

The scripts and procedures discussed here are presented in Smith et al. 2018 So many genes, so little time: A practical approach to divergence-time estimation in the genomic era. Plos One. https://doi.org/10.1371/journal.pone.0197433

Categories¶

phylogenetics