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SNeP

Description

snep website

SNeP is a piece of software written in C++ that performs historical Effective Population Size (Ne) trajectories estimation through Linkage Disequilibrium (LD). Calculations are based on genome-wide genotype data

Environment Modules

Run module spider snep to find out what environment modules are available for this application.

Environment Variables

  • HPC_SNEP_DIR - installation directory
  • HPC_SNEP_BIN - executable directory

Citation

If you publish research that uses snep you have to cite it as follows:

Barbato M, Orozco-terWengel P, Tapio M and Bruford MW (2015). Front. Genet. 6:109. doi: 10.3389/fgene.2015.00109 https://doi.org/10.3389/fgene.2015.00109

Categories

biology, phylogenetics