slivar¶

Description¶

slivar is a set of command-line tools that enables rapid querying and filtering of VCF files. It facilitates operations on trios and groups and allows arbitrary expressions using simple javascript

Environment Modules¶

Run module spider slivar to find out what environment modules are available for this application.

Environment Variables¶

HPC_SLIVAR_DIR - installation directory
HPC_SLIVAR_BIN - executable directory
SLIVAR_HOME - repository directory

Additional Usage Information¶

The $SLIVAR_HOME directory includes the github repo with the javascript (js), tests, and other sub-directories users may find useful.

Categories¶

biology