slivar¶

Description¶

slivar is a set of command-line tools that enables rapid querying and filtering of VCF files. It facilitates operations on trios and groups and allows arbitrary expressions using simple javascript

SLIVAR_HOME - repository directory

Environment Modules¶

Run module spider slivar to find out what environment modules are available for this application.

Environment Variables¶

HPC_SLIVAR_DIR - installation directory
HPC_SLIVAR_BIN - executable directory

Additional Usage Information¶

The $SLIVAR_HOME directory includes the github repo with the javascript (js), tests, and other sub-directories users may find useful.

Categories¶

biology