Usage

UFRC provides a wrapper script for executing the SLAW workflow inside of its container. As such, you should simply call slaw /path/to/input_dir /path/to/output_dir from within your job script.

For example:

module load slaw/20211217
slaw /data/apps/tests/slaw/test_input /data/apps/tests/slaw/test_output

This syntax replaces any"docker run ... or singularity run ... commands given in the examples at https://github.com/zamboni-lab/SLAW#quick-start