Simka

Description

simka website

Simka is a de novo comparative metagenomics tool. Simka represents each dataset as a k-mer spectrum and compute several classical ecological distances between them.

Environment Modules

Run module spider simka to find out what environment modules are available for this application.

Environment Variables

• HPC_SIMKA_DIR - installation directory
• HPC_SIMKA_BIN - executable directory

Categories

phylogenetics