SibeliaZ¶

Description¶

SibeliaZ is a whole-genome alignment and locally-coliinear blocks construction pipeline. The blocks coordinates are output in GFF format and the alignment is in MAF.

Environment Modules¶

Run module spider sibeliaz to find out what environment modules are available for this application.

Environment Variables¶

HPC_SIBELIAZ_DIR - installation directory
HPC_SIBELIAZ_BIN - executable directory

Citation¶

If you publish research that uses sibeliaz you have to cite it as follows:

Scalable multiple whole-genome alignment and locally collinear block construction with SibeliaZ Ilia Minkin, Paul Medvedev bioRxiv 548123; doi: https://doi.org/10.1101/548123

Categories¶

biology, genomics, alignment