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seqmagick

Description

seqmagick website

We often have to convert sequence files between formats and do little manipulations on them, and it's not worth writing scripts for that. seqmagick is a kickass little utility to expose the file format conversion in BioPython in a convenient way. Instead of having a big mess of scripts, there is one that takes arguments

Environment Modules

Run module spider seqmagick to find out what environment modules are available for this application.

Environment Variables

  • HPC_SEQMAGICK_DIR - installation directory
  • HPC_SEQMAGICK_BIN - executable directory

Categories

biology