SE-MEI

Description

se-mei website

This repository contains a number of scripts and programs useful for finding mobile element insertion (MEI) sites from single-end datasets. In short, these programs align soft-clipped regions of alignments against repeat sequences and processes the results to find their locations.

Environment Modules

Run module spider se-mei to find out what environment modules are available for this application.

Environment Variables

• HPC_SEMEI_DIR - installation directory
• HPC_SEMEI_BIN - executable directory

Categories

phylogenetics