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SCIrun

Description

scirun website

SCIRun is a Problem Solving Environment (PSE), for modeling, simulation and visualization of scientific problems. SCIRun now includes the biomedical components formally released as BioPSE, as well as BioMesh3D.

Environment Modules

Run module spider scirun to find out what environment modules are available for this application.

Environment Variables

  • HPC_SCIRUN_BIN - executable directory

Citation

If you publish research that uses scirun you have to cite it as follows:

SCI Institute. SCIRun: A problem solving environment for scientific computing. Scientific Computing and Imaging Institute, University of Utah. https://www.sci.utah.edu/cibc-software/scirun.html

Acknowledgment: This project was supported by the National Institute of General Medical Sciences of the National Institutes of Health under grant numbers P41 GM103545 and R24 GM136986.

Categories

phylogenetics