scGPT

Description

scgpt website

scGPT: Towards Building a Foundation Model for Single-Cell Multi-omics Using Generative AI. A Python package for single-cell multi-omic data analysis using pretrained foundation models.

Environment Modules

Run module spider scgpt to find out what environment modules are available for this application.

Environment Variables

• HPC_SCGPT_DIR - installation directory
• HPC_SCGPT_BIN - executable directory

Categories

Biology, Data_Science, Genomics