run_dbcan

Description

run_dbcan website

This module loads the run_dbcan_new implementation of run_dbCAN, a standalone dbCAN3 annotation tool for automated CAZyme annotation. run_dbcan_new has multiple new features and improved pipeline performance. * DBCAN_REF - dbcan reference directory * KRAKEN2_REF - kraken2 reference directory

Environment Modules

Run module spider run_dbcan to find out what environment modules are available for this application.

Environment Variables

• HPC_RUN_DBCAN_DIR - installation directory
• HPC_RUN_DBCAN_BIN - executable directory

Categories

biology, genomics, annotation