RNAhybrid

Description

rnahybrid website

RNAhybrid is a tool for finding the minimum free energy hybridisation of a long and a short RNA. The hybridisation is performed in a kind of domain mode, ie. the short sequence is hybridised to the best fitting part of the long one. The tool is primarily meant as a means for microRNA target prediction.

Environment Modules

Run module spider rnahybrid to find out what environment modules are available for this application.

Environment Variables

• HPC_RNAHYBRID_DIR - installation directory
• HPC_RNAHYBRID_BIN - executable directory

Categories

biology, genomics