Usage

Make sure that the environmental variable OMP_NUM_THREADS is set to the number of threads you wish to use when executing Reptile when using the reptile-omp binary.

The available binaries and scripts include: - fastq-converter - reptile_merger - reptile-omp - reptile-omp-intel - reptile-v1.1 - seq-analy.

Sample configuration files are in $HPC_REPTILE_CONF