Racon¶

Description¶

Racon is intended as a standalone consensus module to correct raw contigs generated by rapid assembly methods which do not include a consensus step. The goal of Racon is to generate genomic consensus which is of similar or better quality compared to the output generated by assembly methods which employ both error correction and consensus steps, while providing a speedup of several times compared to those methods. It supports data produced by both Pacific Biosciences and Oxford Nanopore Technologies.

Environment Modules¶

Run module spider racon to find out what environment modules are available for this application.

Environment Variables¶

HPC_RACON_DIR - installation directory
HPC_RACON_BIN - executable directory

Categories¶

phylogenetics