quarTeT

Description

quartet website

quarTeT is a collection of tools for T2T genome assembly and basic analysis in automatic workflow. Task include: AssemblyMapper: reference-guided genome assembly GapFiller: long-reads based gap filling TeloExplorer: telomere identification CentroMiner: centromere candidate prediction

Environment Modules

Run module spider quartet to find out what environment modules are available for this application.

Environment Variables

• HPC_QUARTET_DIR - environment directory
• HPC_QUARTET_BIN - dependencies directory
• HPC_QUARTET - installation directory

Categories

phylogenetics