QualiMap¶

Description¶

Qualimap 2 is a platform-independent application written in Java and R that provides both a Graphical User Inteface (GUI) and a command-line interface to facilitate the quality control of alignment sequencing data and its derivatives like feature counts.

Environment Modules¶

Run module spider qualimap to find out what environment modules are available for this application.

Environment Variables¶

HPC_QUALIMAP_DIR - installation directory
HPC_QUALIMAP_BIN - executable directory
HPC_QUALIMAP_LIB - libraries directory
HPC_QUALIMAP_DOC - documentation directory

Categories¶

biology, sequencing, alignment