Citation

If you publish research that uses prottest3 you have to cite it as follows:

Darriba, D., Taboada, G. L., Doallo, R., & Posada, D. (2011). ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics, 27(8), 1164-1165. https://doi.org/10.1093/bioinformatics/btr088

In addition, given that ProtTest uses Phyml intensively, we encourage users to cite this program as well when using ProtTest:

Guindon, S., & Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology, 52(5), 696-704. https://doi.org/10.1080/10635150390235520