ProtHint

Description

prothint website

ProtHint is a pipeline for predicting and scoring hints (in the form of introns, start and stop codons) in the genome of interest by mapping and spliced aligning predicted genes to a database of reference protein sequences.

Environment Modules

Run module spider prothint to find out what environment modules are available for this application.

Environment Variables

• HPC_PROTHINT_DIR - installation directory
• HPC_PROTHINT_BIN - executable directory

Categories

biology, genomics