PRINSEQ

Description

prinseq website

A bioinformatics tool to PRe-process and show INformation of SEQuence data. The tool is written in Perl and can be helpful if you want to filter, reformat, or trim your sequence data. It also generates basic statistics for your sequences.

Environment Modules

Run module spider prinseq to find out what environment modules are available for this application.

Environment Variables

• HPC_PRINSEQ_DIR - installation directory
• HPC_PRINSEQ_BIN - executable directory
• HPC_PRINSEQ_DOC - documentation directory
• HPC_PRINSEQ_EXE - examples directory

Categories

biology, sequencing