popcorn¶
Description¶
Popcorn is a program for estimaing the correlation of causal variant effect sizes across populations in GWAS.
Environment Modules¶
Run module spider popcorn to find out what environment modules are available for this application.
Environment Variables¶
- HPC_POPCORN_DIR - installation directory
- HPC_POPCORN_BIN - executable directory
Additional Usage Information¶
Below is a usage example of Popcorn:
$ python /apps/popcorn/20211104/lib/popcorn/__main__.py compute --bfile /path/to/input/EAS_ref EAS.cscore
Categories¶
phylogenetics, biology