NCBI BLAST+

Description

pmat website

PMAT is an efficient assembly toolkit for assembling plant mitogenomes using third-generation (HiFi/CLR/ONT) sequencing data. PMAT can also be used to assemble chloroplast genomes or animal mitogenomes.

Environment Modules

Run module spider pmat to find out what environment modules are available for this application.

Environment Variables

• HPC_PMAT_DIR - installation directory
• HPC_PMAT_BIN - executable directory

Categories

biology