platanus

Description

platanus website

Platanus is a novel de novo sequence assembler that can reconstruct genomic sequences of highly heterozygous diploids from massively parallel shotgun sequencing data. This module includes the following platanus executables: * Platanus Assembler * Platanus-alle (Platanus2) * Pltanus_trim * MetaPlatanus * BactSNP

Environment Modules

Run module spider platanus to find out what environment modules are available for this application.

Environment Variables

• HPC_PLATANUS_DIR - installation directory
• HPC_PLATANUS_BIN - executable directory

Categories

phylogenetics