Piranha

Description

piranha website

Piranha is a peak-caller for CLIP- and RIP-Seq data. It takes input in BED or BAM format and identifies regions of statistically significant read enrichment. Additional covariates may optionally be provided to further inform the peak-calling process.

Environment Modules

Run module spider piranha to find out what environment modules are available for this application.

Environment Variables

• HPC_PIRANHA_DIR - installation directory
• HPC_PIRANHA_BIN - executable directory
• HPC_PIRANHA_SCRIPTS - scripts directory

Categories

biology, phylogenetics