PILON¶
Description¶
Pilon is a software tool that automatically improves draft assemblies and finds variation among strains, including large event detection. Note: export _JAVA_OPTIONS="-Xmx?g" where ? equals to the available memory.
Environment Modules¶
Run module spider pilon to find out what environment modules are available for this application.
Environment Variables¶
- HPC_PILON_DIR - installation directory
- HPC_PILON_BIN - executable directory
- HPC_PILON_DOC - documentation directory
Citation¶
If you publish research that uses pilon you have to cite it as follows:
Categories¶
biology, ngs, phylogenetics