phylonet

Description

phylonet website

PhyloNet is a tool designed mainly for analyzing, reconstructing, and evaluating reticulate (or non-treelike) evolutionary relationships, generally known as phylogenetic networks. Various methods that we have developed make use of techniques and tools from the domain of phylogenetic trees, and hence the PhyloNet package includes several tools for phylogenetic tree analysis. PhyloNet is released under the GNU General Public License. For the full license, see the file GPL.txt included with this distribution.

Environment Modules

Run module spider phylonet to find out what environment modules are available for this application.

Environment Variables

• HPC_PHYLONET_DIR - installation directory
• HPC_PHYLONET_BIN - executable directory

Citation

If you publish research that uses phylonet you have to cite it as follows:

C. Than, D. Ruths, L. Nakhleh (2008) PhyloNet: A software package for analyzing and reconstructing reticulate evolutionary histories, BMC Bioinformatics 9:322.

Categories

biology, phylogenetics