Skip to content

PHASE

Description

phase website

PHASE: A program for reconstructing haplotypes from population data

Environment Modules

Run module spider phase to find out what environment modules are available for this application.

Environment Variables

  • HPC_PHASE_DIR - installation directory
  • HPC_PHASE_BIN - executable directory
  • HPC_PHASE_DOC - documentation directory
  • HPC_PHASE_EXE - examples directory

Citation

If you publish research that uses phase, please specify the version of the software used, and any deviations from the default options, then cite the following:

Stephens, M., Smith, N. J., & Donnelly, P. (2001). A new statistical method for haplotype reconstruction from population data. American Journal of Human Genetics, 68(4), 978-989. https://doi.org/10.1086/319501

Stephens, M., & Donnelly, P. (2003). A comparison of bayesian methods for haplotype reconstruction from population genotype data. American Journal of Human Genetics, 73(5), 1162-1169. https://doi.org/10.1086/379378

Categories

phylogenetics