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PEET

Description

peet website

PEET (Particle Estimation for Electron Tomography) is an open-source package for aligning and averaging particles in 3-D subvolumes extracted from tomograms. It seeks the optimal alignment of each particle against a reference volume through several iterations. PEET and IMOD are both installed, and most PEET operations are available from the eTomo graphical user interface in IMOD. PEET uses the parallel processing framework within IMOD, so that the lengthy computations can be distributed to multiple cores on one computer, to a set of linked workstations, or to a cluster.

Environment Modules

Run module spider peet to find out what environment modules are available for this application.

Environment Variables

  • HPC_PEET_DIR - installation directory
  • HPC_PEET_BIN - executables directory

Categories

image_processing