pbpigeon¶

Description¶

PacBio Pigeon is a PacBio Transcript Toolkit that contains tools to classify and filter full-length transcript isoforms into categories against a reference annotation. Pigeon is based off of SQANTI3 and the output is compatible with downstream analysis with Seurat.

Environment Modules¶

Run module spider pbpigeon to find out what environment modules are available for this application.

Environment Variables¶

HPC_PBPIGEON_DIR - installation directory
HPC_PBPIGEON_BIN - executable directory

Categories¶

biology, ngs