paraat¶

Description¶

ParaAT (Parallel Alignment and back-Translation) is a tool for constructing multiple protein-coding DNA alignments from protein alignments. It relies on external multiple sequence aligners (e.g., MAFFT, MUSCLE, ClustalW, T-Coffee).

Environment Modules¶

Run module spider paraat to find out what environment modules are available for this application.

Environment Variables¶

HPC_PARAAT_DIR - installation directory
HPC_PARAAT_BIN - executable directory

Categories¶

bioinformatics, alignment