pantools

Description

pantools website

PanTools is a toolkit for comparative analysis of large number of genomes, providing the following functionalities: * Construction of a panproteome * Adding new genomes to the pangenome * Adding structural/functional annotations to the genomes * Detecting homology groups based on similarity of proteins * Optimization of homology grouping using BUSCO * Read mapping * Gene classification * Phylogenetic methods

Environment Modules

Run module spider pantools to find out what environment modules are available for this application.

Environment Variables

• HPC_PANTOOLS_DIR - installation directory
• HPC_PANTOOLS_BIN - executable directory

Categories

biology, genomics