owitools¶
Description¶
owitools: A metabarcoding pipeline based on OBITools, incorporating additional tools for chimera detection, clustering, and performance optimization. This pipeline is packaged in a Docker container and run through Apptainer on this HPC environment. It includes a familiar RStudio interface for data analysis and reporting. Citation: Owen Wangensteen, SeaDNA Project For more information, visit: https://github.com/bailliecharles/owitools
Environment Modules¶
Run module spider owitools to find out what environment modules are available for this application.
Environment Variables¶
Categories¶
metabarcoding, bioinformatics, ecology