nubeamdedup

Description

nubeamdedup website

nubeam-dedup is a fast and easy-to-use bioinformatics tool removing exact PCR duplicates for sequencing reads, single-end or paired-end. We appreciate your interest in nubeam-dedup.

Environment Modules

Run module spider nubeamdedup to find out what environment modules are available for this application.

Environment Variables

• HPC_NUBEAMDEDUP_DIR - installation directory
• HPC_NUBEAMDEDUP_BIN - executable directory

Citation

If you publish research that uses nubeamdedup you have to cite it as follows:

Dai, H., & Guan, Y. (2020). Nubeam-dedup: a fast and RAM-efficient tool to de-duplicate sequencing reads without mapping. Bioinformatics, 36(10), 3254–3256. https://doi.org/10.1093/bioinformatics/btaa123

Categories

phylogenetics