ntEdit

Description

ntedit website

ntEdit is a scalable genomics application for polishing genome assembly drafts. ntEdit simplifies polishing and "haploidization" of gene and genome sequences with its re-usable Bloom filter design. We expect ntEdit to have additional applications in fast mapping of simple nucleotide variations between any two individuals or species’ genomes.

Environment Modules

Run module spider ntedit to find out what environment modules are available for this application.

Environment Variables

• HPC_NTEDIT_DIR - installation directory
• HPC_NTEDIT_BIN - executable directory

Categories

phylogenetics