NLR-Parser¶
Description¶
NLR-Parser is a tool to rapidly annotate the NLR complement from sequenced plant genomes.
The NLR-Parser refines the output of MAST and reliably annotates disease resistance genes encoding for nucleotide-binding leucine-rich repeat (NLR) proteins.
Environment Modules¶
Run module spider nlr-parser to find out what environment modules are available for this application.
Environment Variables¶
- HPC_NLRPARSER_DIR - installation directory
- HPC_NLRPARSER_BIN - executable directory
Additional Usage Information¶
NLR motif definitions file is located in the $HPC_NLRPARSER_XML directory.
Citation¶
If you publish research that uses nlr-parser you have to cite it as follows:
For using the NLR motifs:
Categories¶
phylogenetics