Citation
If you publish research that uses nextgenmap you have to cite it as follows:
Sedlazeck, F. J., Rescheneder, P., & von Haeseler, A. (2013). NextGenMap: fast and accurate read mapping in highly polymorphic genomes. Bioinformatics, 29(21), 2790–2791. https://doi.org/10.1093/bioinformatics/btt468