Skip to content

NeEstimator

Description

neestimator website

NeEstimator is a tool for estimating contemporary effective population size (Ne) using multi-locus diploid genotypes from population samples.

Environment Modules

Run module spider neestimator to find out what environment modules are available for this application.

Environment Variables

  • HPC_NEESTIMATOR_DIR - installation directory
  • HPC_NEESTIMATOR_BIN - executable directory

Additional Usage Information

Note: This software is inside of the container.

Usage example: 

Ne2L

If you want to use a GUI session, please visit our GUI Programs Help Page.

Citation

If you publish research that uses neestimator you have to cite it as follows:

Do, C., Waples, R. S., Peel, D., Macbeth, G. M., Tillett, B. J., & Ovenden, J. R. (2014). NeEstimator V2: re-implementation of software for the estimation of contemporary effective population size (Ne) from genetic data. Molecular Ecology Resources, 14, 209–214. https://doi.org/10.1111/1755-0998.12157

Categories

biology