Nanocompore¶

Description¶

Nanocompore identifies differences in ONT nanopore sequencing raw signal corresponding to RNA modifications by comparing 2 samples

Environment Modules¶

Run module spider nanocompore to find out what environment modules are available for this application.

Environment Variables¶

HPC_NANOCOMPORE_DIR - installation directory
HPC_NANOCOMPORE_BIN - executable directory

Additional Usage Information¶

If you publish research that uses Nanocompore you have to cite it as follows:

Adrien Leger, Paulo P. Amaral, Luca Pandolfini, Charlotte Capitanchik, Federica Capraro, Isaia Barbieri, Valentina Migliori, Nicholas M. Luscombe, Anton J Enright, Konstantinos Tzelepis, Jernej Ule, Tomas Fitzgerald, Ewan Birney, Tommaso Leonardi, Tony Kouzarides, RNA modifications detection by comparative Nanopore direct RNA sequencing, bioRxiv 843136; doi: https://doi.org/10.1101/843136

Categories¶

biology, genomics