MIRA¶

Description¶

MIRA is a whole genome shotgun and EST sequence assembler for Sanger, 454, Solexa (Illumina), IonTorrent data and PacBio (the later at the moment only CCS and error-corrected CLR reads). It can be seen as a Swiss army knife of sequence assembly developed and used in the past 12 years to get assembly jobs done efficiently and accurately that is, without actually putting too much manual work into finishing the assembly.

Environment Modules¶

Run module spider mira to find out what environment modules are available for this application.

Environment Variables¶

HPC_MIRA_DIR - Installation directory
HPC_MIRA_BIN - Executable directory
HPC_MIRA_DOC - Documentation directory

Categories¶

biology, genomics, assembly